Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11517705_11518409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11517705 - 11518409

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCAGT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

TCTTCAGTGATC

Flanking Amino Acid:

VCLVKNNQPLGATIKRHEIT

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

65.4

Major BPS

63.9

0.34

1.2

40.9

Major PPT

77.9

0.63

72.5

42.4

Minor 5ss

39.9

-1.1

3.2

54.1

45.1

Minor BPS

48.4

-0.1

2.3

66.36

Associated Gene:

Gene:

MPP4

Ensembl Gene ID:

ENSAPLG00000009743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044348

11502598 - 11522288

19691

ENSAPLT00000040303

11502598 - 11522288

19691

ENSAPLT00000026246

11502598 - 11522288

19691

ENSAPLT00000010168

11502598 - 11522288

19691