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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11517705_11519081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11517705 - 11519081

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

TCTTCAGTGATC

Flanking Amino Acid:

RRLLRAPHLRGATIKRHEIT

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

85.9

28.3

Major BPS

63.9

0.34

1.2

40.9

Major PPT

77.9

0.63

72.5

42.4

Minor 5ss

24.6

-2.9

33.3

41.7

Minor BPS

48.4

-0.1

2.3

66.36

Associated Gene:

Gene:

MPP4

Ensembl Gene ID:

ENSAPLG00000009743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044940

11502598 - 11522288

19691