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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11518542_11519081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11518542 - 11519081

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTTTGTAACA

Flanking Amino Acid:

RRLLRAPHLRAMLSAHDTVA

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

85.9

28.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

83.9

0.76

0.9

35.4

Minor 5ss

24.6

-2.9

33.3

41.7

Minor BPS

66.5

0.51

82.25

33.1

Associated Gene:

Gene:

MPP4

Ensembl Gene ID:

ENSAPLG00000009743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040303

11502598 - 11522288

19691

ENSAPLT00000026246

11502598 - 11522288

19691

ENSAPLT00000010168

11502598 - 11522288

19691