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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11519751_11520693_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11519751 - 11520693

Intron Length:

943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TGGCATGCAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TTGTCTATCATG

Flanking Amino Acid:

RSHWLQALLKIYECLQNYLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

57.6

0.17

1.1

50.8

42.5

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

47.9

-0.3

2.1

59.53

43.1

Associated Gene:

Gene:

MPP4

Ensembl Gene ID:

ENSAPLG00000009743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026246

11502598 - 11522288

19691

ENSAPLT00000010168

11502598 - 11522288

19691

ENSAPLT00000044940

11502598 - 11522288

19691

ENSAPLT00000044348

11502598 - 11522288

19691

ENSAPLT00000040303

11502598 - 11522288

19691