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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11531796_11532075_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11531796 - 11532075

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CACCATGTACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TCTCTCCCACCA

Flanking Amino Acid:

PVFLYVVLRARIRNLGSEVH

Intron Amino Acid Position:

1582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

77.5

0.68

79.6

Major PPT

49.1

-0

1.1

45.1

39.9

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

43.3

-0.5

57.29

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028654

11530279 - 11564582

34304

ENSAPLT00000022001

11530279 - 11564582

34304

ENSAPLT00000009633

11530279 - 11564582

34304