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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11540944_11541285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11540944 - 11541285

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTATACTTACTG

Flanking Amino Acid:

EGAFSTNKMMGTGILLSEDD

Intron Amino Acid Position:

1194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

74.4

0.55

0.9

69.6

36.1

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

56.6

0.07

1.9

65.18

42.7

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028654

11530279 - 11564582

34304

ENSAPLT00000022001

11530279 - 11564582

34304

ENSAPLT00000009633

11530279 - 11564582

34304