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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11546078_11546348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11546078 - 11546348

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

AACTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

GTTAGCTAAATT

Flanking Amino Acid:

VLLSSTPQEKTKWLRAISQA

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.1

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

73.5

0.53

69.5

40.8

Minor 5ss

37.9

-1.4

3.1

50.4

46.1

Minor BPS

50.2

0.08

2.1

73.21

43.9

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022001

11530279 - 11564582

34304

ENSAPLT00000009633

11530279 - 11564582

34304

ENSAPLT00000028654

11530279 - 11564582

34304