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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11553656_11555230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11553656 - 11555230

Intron Length:

1575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTGTTCATT

Flanking Amino Acid:

SPVLLLSCSKIGYISNVIAG

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

0.01

2.4

75.64

41.8

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028654

11530279 - 11564582

34304

ENSAPLT00000022001

11530279 - 11564582

34304

ENSAPLT00000009633

11530279 - 11564582

34304