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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11556839_11557263_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11556839 - 11557263

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TGGAAATTGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TCGTTGTTAACA

Flanking Amino Acid:

GQLGHGDVLPRLQPLCVKSL

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

58.3

0.19

1.2

48.6

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

59.4

0.29

2.1

70.13

42.8

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009633

11530279 - 11564582

34304

ENSAPLT00000028654

11530279 - 11564582

34304

ENSAPLT00000022001

11530279 - 11564582

34304