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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11558639_11559919_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11558639 - 11559919

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCCTGCACA

5'SS Class:

weak_major

3'SS Sequence:

TCTTTGGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATATTTTTACCT

Flanking Amino Acid:

HTLNETLGKNPSQEEQVSAC

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.4

57.4

41.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.8

0.65

0.9

76.9

37.3

Minor 5ss

33.3

-1.9

3.8

45.6

42.5

Minor BPS

63.9

0.51

1.6

78.4

38.1

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009633

11530279 - 11564582

34304

ENSAPLT00000028654

11530279 - 11564582

34304

ENSAPLT00000022001

11530279 - 11564582

34304