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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11560819_11562437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11560819 - 11562437

Intron Length:

1619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTTTTTTTAATA

Flanking Amino Acid:

GTNHGLLLTEGGEVYSFGKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.9

0.74

0.8

29.6

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

75.3

0.79

1.1

33.3

Associated Gene:

Gene:

ALS2

Ensembl Gene ID:

ENSAPLG00000009216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028654

11530279 - 11564582

34304

ENSAPLT00000022001

11530279 - 11564582

34304

ENSAPLT00000009633

11530279 - 11564582

34304