Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11578049_11584505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11578049 - 11584505

Intron Length:

6457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACTGACC

5'SS Class:

major

3'SS Sequence:

GGGTTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

CATGAGTTAATA

Flanking Amino Acid:

ATDYSSDLDIWSAGCIFVEM

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.29

1.1

56.2

40.9

Major BPS

75.8

0.64

65.8

Major PPT

76.3

0.59

69.6

41.6

Minor 5ss

32.7

-2

3.3

41.1

40.1

Minor BPS

45.7

-0.3

2.2

56.9

42.8

Associated Gene:

Gene:

CDK15

Ensembl Gene ID:

ENSAPLG00000009047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009413

11568394 - 11601756

33363