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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11774768_11776065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11774768 - 11776065

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTACGTTCAAGT

Flanking Amino Acid:

KVDTMIVQAISLLDDLDKEL

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

84.6

0.78

0.6

84.8

22.9

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

45.3

-0.2

2.1

66.32

44.3

Associated Gene:

Gene:

NOP58

Ensembl Gene ID:

ENSAPLG00000008524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008904

11767747 - 11781129

13383