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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11776201_11777058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11776201 - 11777058

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATGCTTTCATCT

Flanking Amino Acid:

LTYCKCVRKVGDRRNFASSD

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

76.7

0.6

0.8

30.9

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

46.8

-0.1

1.7

63.41

41.2

Associated Gene:

Gene:

NOP58

Ensembl Gene ID:

ENSAPLG00000008524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008904

11767747 - 11781129

13383