Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11892124_11896745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11892124 - 11896745

Intron Length:

4622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATATTTTAATT

Flanking Amino Acid:

YLLVMEYYPNGSLCKYLSLH

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.4

0.62

73.7

41.5

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

66.6

0.6

1.2

75.73

34.9

Associated Gene:

Gene:

BMPR2

Ensembl Gene ID:

ENSAPLG00000008092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008478

11862747 - 11909476

46730