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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11990515_11991652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11990515 - 11991652

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTGCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTGCTGTTAACC

Flanking Amino Acid:

GQLLDVTSTQDVSDEKCGDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

68.4

0.41

1.1

70.7

38.8

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

50.6

-0

2.1

62.8

Associated Gene:

Gene:

CARF

Ensembl Gene ID:

ENSAPLG00000007561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007840

11990394 - 12010611

20218