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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11992914_11997419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11992914 - 11997419

Intron Length:

4506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TATTATTTCACC

Flanking Amino Acid:

AWARRLRNCEKIGDSYRGYC

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.5

32.2

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

78.9

0.65

0.8

73.6

30.3

Minor 5ss

38.7

-1.3

49.2

47.3

Minor BPS

57.6

0.22

1.9

72.39

38.6

Associated Gene:

Gene:

CARF

Ensembl Gene ID:

ENSAPLG00000007561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007840

11990394 - 12010611

20218