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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11999889_12000675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11999889 - 12000675

Intron Length:

787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

GHLYKATCPARIYIKKVQKF

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

60.4

0.23

1.1

62.8

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

CARF

Ensembl Gene ID:

ENSAPLG00000007561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007840

11990394 - 12010611

20218