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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12149056_12151879_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12149056 - 12151879

Intron Length:

2824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGTC

5'SS Class:

strong_major

3'SS Sequence:

ACATGATACCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTTCTGAACA

Flanking Amino Acid:

LSKERAQKLEAISRLCEDKY

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

73.2

36.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

53.7

0.08

44.4

Minor 5ss

33.8

-1.8

3.7

49.8

46.8

Minor BPS

73.9

0.75

1.3

81.01

33.9

Associated Gene:

Gene:

CCNYL1

Ensembl Gene ID:

ENSAPLG00000007167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024753

12148939 - 12169307

20369

ENSAPLT00000007460

12148939 - 12171822

22884