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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12152043_12157027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12152043 - 12157027

Intron Length:

4985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACAAT

U12 Branch Point Sequence:

TTTTCCTTTGTT

Flanking Amino Acid:

QILKDITVEDMNEMERHFLE

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

75.2

35.8

Major BPS

49.4

-0

1.3

57.1

35.8

Major PPT

73.7

0.53

0.8

65.9

Minor 5ss

-0.8

2.8

57.2

40.7

Minor BPS

48.6

-0

3.6

87.87

37.8

Associated Gene:

Gene:

CCNYL1

Ensembl Gene ID:

ENSAPLG00000007167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024753

12148939 - 12169307

20369

ENSAPLT00000007460

12148939 - 12171822

22884