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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12165353_12166944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12165353 - 12166944

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTCTTTTCCT

Flanking Amino Acid:

EKRKSNHINHVSPGQLTKKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

62.9

0.29

0.9

62.7

25.7

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

CCNYL1

Ensembl Gene ID:

ENSAPLG00000007167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024753

12148939 - 12169307

20369

ENSAPLT00000007460

12148939 - 12171822

22884