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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12211443_12212894_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
12211443 - 12212894

Intron Length:
1452

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTATGTAGT

5'SS Class:
major

3'SS Sequence:
GCTTCATCTTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
AATGTCTTAAAT

Flanking Amino Acid:
PIYQTSSGQYIAITQGGAIQ

Intron Amino Acid Position:
169

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.46
1.1
68.5
42.2

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
77.9
0.63
0.9
74
35.7

Minor 5ss
45.7
-0.4
2.6
65.1
40.1

Minor BPS
64.7
0.54
1.5
76.59
39.6

Associated Gene:

Gene:
CREB1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12207395 - 12221503
14109