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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12414356_12415024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12414356 - 12415024

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAGTA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTATTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

CCTTCTTTTATT

Flanking Amino Acid:

LTNPLQIWITSASAPICYQL

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

0.9

73.6

30.1

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

80.4

0.68

0.8

81.6

28.7

Minor 5ss

27.9

-2.5

3.4

37.8

Minor BPS

62.7

0.48

1.6

74.98

42.6

Associated Gene:

Gene:

MDH1B

Ensembl Gene ID:

ENSAPLG00000006087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041806

12412662 - 12420512

7851

ENSAPLT00000006316

12412662 - 12420512

7851