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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12415528_12416036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12415528 - 12416036

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

LARKLNMNAAGVKDVIVWGN

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

83.7

27.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.9

0.78

0.8

80.1

31.9

Minor 5ss

32.5

-2

3.5

48.7

47.5

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

MDH1B

Ensembl Gene ID:

ENSAPLG00000006087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041806

12412662 - 12420512

7851

ENSAPLT00000006316

12412662 - 12420512

7851