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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12475_12856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12475 - 12856

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TTTTTCCCCACT

Flanking Amino Acid:

QSQSSIHECLADSELAWIPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.5

37.2

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

63.1

0.29

0.9

62.1

33.6

Minor 5ss

-1.9

2.9

37.4

41.9

Minor BPS

49.3

0.03

2.3

80.59

41.2

Associated Gene:

Gene:

STRADB

Ensembl Gene ID:

ENSAPLG00000014653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048196

7561 - 14454

6894

ENSAPLT00000015296

7561 - 14454

6894