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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12487690_12489679_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
12487690 - 12489679

Intron Length:
1990

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTAAT

5'SS Class:
strong_major

3'SS Sequence:
TCTTCATCAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TCTTCATCAACA

Flanking Amino Acid:
QDGYACDSNQSPQDLTNFVM

Intron Amino Acid Position:
553

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.7
0.96
0.8
88.7
25.1

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
75.1
0.57
0.9
70.4
33.9

Minor 5ss
43.5
-0.7
2.6
59.2
45.4

Minor BPS
64.4
0.45
1.8
77.1
39.6

Associated Gene:

Gene:
ADAM23

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12482711 - 12536236
53526