Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_12492797_12495574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12492797 - 12495574

Intron Length:

2778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGCT

U12 Branch Point Sequence:

TGCTCTTTTGCT

Flanking Amino Acid:

GACLFNRPTKLFETTECGNG

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

87.2

0.84

0.8

84.6

30.3

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

-0.4

3.6

72.3

44.7

Associated Gene:

Gene:

ADAM23

Ensembl Gene ID:

ENSAPLG00000005205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005457

12482711 - 12536236

53526