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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12604718_12604902_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
12604718 - 12604902

Intron Length:
185

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGAGGGCG

5'SS Class:
major

3'SS Sequence:
TTGCTTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTAAC

U12 Branch Point Sequence:
GAGGGGCTAACG

Flanking Amino Acid:
DFLADKSYIEGYVPSQADIA

Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1
57.4
41.8

Major BPS
51.7
0.04
1.3
55.3
40.3

Major PPT
78.3
0.64
0.8
73.5
31.5

Minor 5ss
23.7
-3
3.2
21.5
37.3

Minor BPS
35.2
-1.2
2.5
37.57
44.6

Associated Gene:

Gene:
EEF1B2

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12601344 - 12604982
3639