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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12606202_12607402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12606202 - 12607402

Intron Length:

1201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGGGCA

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCAAATGGAATT

Flanking Amino Acid:

MVNPGTTVLQACEKAGIQIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.5

35.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

88.5

0.87

0.6

22.5

Minor 5ss

30.1

-2.3

3.4

38.3

46.9

Minor BPS

40.2

-0.6

2.1

55.06

41.1

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027710

12605749 - 12619110

13362

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636