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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12607511_12608627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12607511 - 12608627

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAT

5'SS Class:

major

3'SS Sequence:

GTGATGATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGTGCTCACTC

Flanking Amino Acid:

CLVEIEKAPKPVAACAMPVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.2

36.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.38

1.1

58.8

Minor 5ss

44.6

-0.6

3.2

64.1

47.4

Minor BPS

46.7

-0.2

2.2

61.97

44.1

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636

ENSAPLT00000027710

12605749 - 12619110

13362