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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12611096_12612121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12611096 - 12612121

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTTTTGTTCACA

Flanking Amino Acid:

EDVLTRVAGVLQAVEGKDVA

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

82.6

29.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

37.2

-1.4

46.4

Minor BPS

49.5

-0

2.4

70.02

42.9

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636

ENSAPLT00000027710

12605749 - 12619110

13362