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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12614965_12616646_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12614965 - 12616646

Intron Length:

1682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTGTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TCTGAAATAACC

Flanking Amino Acid:

SDWKVMNILHRVASQVAALD

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

72.6

39.2

Major BPS

82.1

0.8

71.6

36.4

Major PPT

86.6

0.82

0.7

80.9

31.3

Minor 5ss

57.9

0.27

2.4

73.9

42.6

Minor BPS

45.9

-0.3

2.1

61.55

43.3

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027710

12605749 - 12619110

13362

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636