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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12616802_12617394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12616802 - 12617394

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCATCTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

ATGGCTTTTACT

Flanking Amino Acid:

LPKDCFIIYQGHHGDVGAPM

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.7

34.8

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

71.5

0.48

0.9

69.8

35.5

Minor 5ss

37.5

-1.4

2.8

52.1

44.3

Minor BPS

57.9

0.33

1.8

73.68

43.4

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636

ENSAPLT00000027710

12605749 - 12619110

13362