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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12617571_12618296_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12617571 - 12618296

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCATTT

5'SS Class:

major

3'SS Sequence:

ACGAATCTCTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TTTCTACGAATC

Flanking Amino Acid:

DWRIIRAVSEMAGMTLPYEN

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.2

72.7

39.6

Major BPS

0.62

65.3

41.5

Major PPT

59.2

0.21

0.9

54.9

40.4

Minor 5ss

48.3

-0.1

3.2

42.4

Minor BPS

45.3

-0.3

1.9

62.69

36.1

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636

ENSAPLT00000027710

12605749 - 12619110

13362