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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12618713_12619019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12618713 - 12619019

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GTTTACACAAAA

Flanking Amino Acid:

QLTIKDFYMTDSISRASQTM

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

46.7

-0.2

64.61

40.6

Associated Gene:

Gene:

NDUFS1

Ensembl Gene ID:

ENSAPLG00000004262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017684

12605749 - 12621231

15483

ENSAPLT00000004426

12605749 - 12619384

13636