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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12638988_12644557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12638988 - 12644557

Intron Length:

5570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

AAGAACTGAATT

Flanking Amino Acid:

TNPIPKSEDRRYCNSHLQVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

75.2

0.57

77.4

28.8

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

48.8

-0

1.6

62.8

40.8

Associated Gene:

Gene:

INO80D

Ensembl Gene ID:

ENSAPLG00000004131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004247

12638539 - 12662243

23705

ENSAPLT00000020235

12638741 - 12663340

24600