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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12656386_12657802_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

12656386 - 12657802

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTATCCTCT

5'SS Class:

strong_minor

3'SS Sequence:

CAGAAATGTACAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TATTCCTGATGC

Flanking Amino Acid:

ALPFTRHCFQHILLNRSQQL

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.1

-0.1

1.4

46.8

44.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

55.4

0.12

1.1

46.3

44.4

Minor 5ss

81.6

1.07

1.4

36.9

Minor BPS

52.3

0.05

68.63

42.5

Associated Gene:

Gene:

INO80D

Ensembl Gene ID:

ENSAPLG00000004131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020235

12638741 - 12663340

24600

ENSAPLT00000004247

12638539 - 12662243

23705