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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12657937_12659317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12657937 - 12659317

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TATTGTTTTATT

Flanking Amino Acid:

PLCEEHAKKMDNFLRGDSSR

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

70.7

0.47

71.6

33.2

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

53.9

0.2

76.34

41.1

Associated Gene:

Gene:

INO80D

Ensembl Gene ID:

ENSAPLG00000004131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020235

12638741 - 12663340

24600

ENSAPLT00000004247

12638539 - 12662243

23705