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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12659536_12659935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12659536 - 12659935

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGTGGC

5'SS Class:

major

3'SS Sequence:

ACTTTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

ACTTTCTGTACA

Flanking Amino Acid:

VSLPVEMPHIRSPSTPELSA

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.3

63.6

42.3

Major BPS

0.47

1.2

69.9

35.3

Major PPT

78.1

0.63

0.9

72.5

37.1

Minor 5ss

28.9

-2.4

36.3

40.6

Minor BPS

53.4

0.1

1.8

65.94

40.6

Associated Gene:

Gene:

INO80D

Ensembl Gene ID:

ENSAPLG00000004131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020235

12638741 - 12663340

24600

ENSAPLT00000004247

12638539 - 12662243

23705