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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12716137_12718469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12716137 - 12718469

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTGCG

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TAATTCTAAATT

Flanking Amino Acid:

GTDIPLENCMEPITAFPVNF

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

60.8

44.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

31.5

-2.1

3.2

32.6

42.1

Minor BPS

0.52

1.6

77.44

39.2

Associated Gene:

Gene:

NRP2

Ensembl Gene ID:

ENSAPLG00000002735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033840

12707782 - 12781862

74081

ENSAPLT00000002886

12700636 - 12781863

81228