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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12748105_12749934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12748105 - 12749934

Intron Length:

1830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCGCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGTTCCCGCTCC

Flanking Amino Acid:

YYLIQQEVPENFQCNVPLGM

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

72.4

0.5

0.9

62.2

39.8

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

-1.1

3.6

61.03

43.7

Associated Gene:

Gene:

NRP2

Ensembl Gene ID:

ENSAPLG00000002735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002886

12700636 - 12781863

81228

ENSAPLT00000033840

12707782 - 12781862

74081