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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1278633_1281393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1278633 - 1281393

Intron Length:

2761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATGAAT

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

VSSVKPQEGDDKLYTVFNVF

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

71.8

39.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

91.9

0.94

0.6

91.8

19.1

Minor 5ss

34.5

-1.8

3.3

49.5

46.5

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

RFTN2

Ensembl Gene ID:

ENSAPLG00000005755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005976

1269596 - 1297357

27762