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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12938_13223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12938 - 13223

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

AGTCCACCAACA

Flanking Amino Acid:

MSCLDCSCILRTPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

64.9

0.37

29.8

Major PPT

62.6

0.28

1.7

69.2

41.8

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

44.6

-0.4

59.36

39.1

Associated Gene:

Gene:

STRADB

Ensembl Gene ID:

ENSAPLG00000014653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015296

7561 - 14454

6894

ENSAPLT00000048196

7561 - 14454

6894