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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12988119_12990134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12988119 - 12990134

Intron Length:

2016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTGGACTT

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AATATTTTACTT

Flanking Amino Acid:

EDLLNEDYNHSPITNSAMYL

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.2

67.6

43.5

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

32.9

-2

3.4

48.2

47.4

Minor BPS

51.9

0.14

1.6

67.4

37.9

Associated Gene:

Gene:

PARD3B

Ensembl Gene ID:

ENSAPLG00000002583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027146

12806755 - 13199176

392422

ENSAPLT00000002635

12806755 - 13199176

392422

ENSAPLT00000048145

12806755 - 13199176

392422

ENSAPLT00000047857

12806755 - 13199176

392422

ENSAPLT00000045439

12806755 - 13199176

392422