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Intron Name: Anas_platyrhynchos_platyrhynchos_7_12996127_13005570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12996127 - 13005570

Intron Length:

9444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATA

Flanking Amino Acid:

SVIHGGAAFKDRLDQGAFKK

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

80.4

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.7

81.5

30.5

Minor 5ss

-1.1

3.2

56.4

Minor BPS

77.8

0.87

80.84

27.9

Associated Gene:

Gene:

PARD3B

Ensembl Gene ID:

ENSAPLG00000002583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027146

12806755 - 13199176

392422