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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13021188_13022776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13021188 - 13022776

Intron Length:

1589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGATGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TAAAACTTACAT

Flanking Amino Acid:

AKKIKIDLKKGPEGLGFTVV

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

70.7

0.47

61.7

44.2

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

47.6

-0.1

1.9

65.76

43.6

Associated Gene:

Gene:

PARD3B

Ensembl Gene ID:

ENSAPLG00000002583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045439

12806755 - 13199176

392422

ENSAPLT00000027146

12806755 - 13199176

392422

ENSAPLT00000002635

12806755 - 13199176

392422

ENSAPLT00000048145

12806755 - 13199176

392422

ENSAPLT00000047857

12806755 - 13199176

392422