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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1308173_1309452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1308173 - 1309452

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGATTTTGATG

Flanking Amino Acid:

DEGVWKYEHLRQFCLELNGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

91.7

0.94

0.5

92.2

18.3

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

54.1

-0

1.4

57.69

38.9

Associated Gene:

Gene:

HSPE1-MOB4

Ensembl Gene ID:

ENSAPLG00000019077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034710

1305056 - 1310940

5885

ENSAPLT00000030112

1305056 - 1314520

9465