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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13173346_13198879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13173346 - 13198879

Intron Length:

25534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAGAA

U12 Branch Point Sequence:

TGTCTCTTACAG

Flanking Amino Acid:

LQRYRRAQEKDSTYWVNIHH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

72.1

39.1

Major BPS

54.8

0.12

1.2

52.7

43.2

Major PPT

82.3

0.73

0.8

76.1

32.6

Minor 5ss

27.1

-2.6

2.9

31.3

42.6

Minor BPS

49.9

-0.1

1.8

58.62

42.7

Associated Gene:

Gene:

PARD3B

Ensembl Gene ID:

ENSAPLG00000002583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047857

12806755 - 13199176

392422

ENSAPLT00000045439

12806755 - 13199176

392422

ENSAPLT00000027146

12806755 - 13199176

392422

ENSAPLT00000002635

12806755 - 13199176

392422

ENSAPLT00000048145

12806755 - 13199176

392422