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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1328581_1329267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1328581 - 1329267

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CGGTTTTTAACG

Flanking Amino Acid:

LDAMFPEGYKVLPPPAGYVP

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

79.8

35.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

70.8

0.47

0.9

68.4

31.8

Minor 5ss

-1.6

50.1

46.1

Minor BPS

62.4

0.25

1.4

58.91

43.4

Associated Gene:

Gene:

SF3B1

Ensembl Gene ID:

ENSAPLG00000003993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004118

1322556 - 1337993

15438