Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_1332425_1333019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1332425 - 1333019

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTATATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTTTCCTCACTT

Flanking Amino Acid:

MALDRRNYRQLVDTTVELAN

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.6

31.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

74.5

0.55

70.6

44.1

Minor 5ss

43.6

-0.7

2.6

59.8

44.7

Minor BPS

61.8

0.45

1.8

81.06

40.8

Associated Gene:

Gene:

SF3B1

Ensembl Gene ID:

ENSAPLG00000003993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004118

1322556 - 1337993

15438